Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR31504.1 | SFR35920.1 | SAMN04488005_0069 | SAMN04488005_0894 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.947 |
SFR31504.1 | SFR42868.1 | SAMN04488005_0069 | SAMN04488005_1832 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.999 |
SFR31504.1 | SFR47452.1 | SAMN04488005_0069 | SAMN04488005_2371 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Luciferase-type oxidoreductase, BA3436 family. | 0.907 |
SFR31504.1 | SFR47460.1 | SAMN04488005_0069 | SAMN04488005_2372 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.918 |
SFR31504.1 | SFR47467.1 | SAMN04488005_0069 | SAMN04488005_2373 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Alcohol dehydrogenase GroES-like domain-containing protein. | 0.783 |
SFR31760.1 | SFR38502.1 | SAMN04488005_0170 | SAMN04488005_1242 | NAD(P)H-dependent FMN reductase. | Hypothetical protein. | 0.732 |
SFR31760.1 | SFR47452.1 | SAMN04488005_0170 | SAMN04488005_2371 | NAD(P)H-dependent FMN reductase. | Luciferase-type oxidoreductase, BA3436 family. | 0.492 |
SFR35920.1 | SFR31504.1 | SAMN04488005_0894 | SAMN04488005_0069 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.947 |
SFR35920.1 | SFR42868.1 | SAMN04488005_0894 | SAMN04488005_1832 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.565 |
SFR35920.1 | SFR47452.1 | SAMN04488005_0894 | SAMN04488005_2371 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Luciferase-type oxidoreductase, BA3436 family. | 0.551 |
SFR35920.1 | SFR47460.1 | SAMN04488005_0894 | SAMN04488005_2372 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.420 |
SFR35920.1 | SFR47467.1 | SAMN04488005_0894 | SAMN04488005_2373 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Alcohol dehydrogenase GroES-like domain-containing protein. | 0.562 |
SFR38502.1 | SFR31760.1 | SAMN04488005_1242 | SAMN04488005_0170 | Hypothetical protein. | NAD(P)H-dependent FMN reductase. | 0.732 |
SFR38502.1 | SFR47452.1 | SAMN04488005_1242 | SAMN04488005_2371 | Hypothetical protein. | Luciferase-type oxidoreductase, BA3436 family. | 0.687 |
SFR42868.1 | SFR31504.1 | SAMN04488005_1832 | SAMN04488005_0069 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.999 |
SFR42868.1 | SFR35920.1 | SAMN04488005_1832 | SAMN04488005_0894 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.565 |
SFR42868.1 | SFR47452.1 | SAMN04488005_1832 | SAMN04488005_2371 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Luciferase-type oxidoreductase, BA3436 family. | 0.706 |
SFR42868.1 | SFR47460.1 | SAMN04488005_1832 | SAMN04488005_2372 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.523 |
SFR42868.1 | SFR47467.1 | SAMN04488005_1832 | SAMN04488005_2373 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Alcohol dehydrogenase GroES-like domain-containing protein. | 0.609 |
SFR45004.1 | SFR47452.1 | SAMN04488005_2095 | SAMN04488005_2371 | Hypothetical protein. | Luciferase-type oxidoreductase, BA3436 family. | 0.531 |
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