STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR54929.1Polysaccharide export outer membrane protein. (448 aa)    
Predicted Functional Partners:
SFR44594.1
G-rich domain on putative tyrosine kinase.
 
 0.999
SFR44633.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 
 0.671
SFR53106.1
Capsular polysaccharide transport system permease protein.
 
  
 0.604
SFR42923.1
Capsular polysaccharide transport system permease protein.
 
  
 0.601
SFR53098.1
Capsular polysaccharide transport system permease protein.
 
  
 0.588
SFR56053.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.587
SFR54892.1
Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
     
 0.572
SFR47262.1
Capsular polysaccharide transport system permease protein.
 
  
 0.540
SFR54918.1
Diguanylate cyclase/phosphodiesterase.
     
 0.536
SFR42907.1
ABC-type polysaccharide/polyol phosphate export permease.
  
  
 0.517
Your Current Organism:
Yoonia tamlensis
NCBI taxonomy Id: 390270
Other names: DSM 26879, JCM 14020, KCTC 12722, Loktanella tamlensis, Loktanella tamlensis Lee 2012, Y. tamlensis, strain SSW-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.