STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKY54652.1Hydrogenase formation protein HypD; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)    
Predicted Functional Partners:
OKY54651.1
Hydrogenase expression/formation protein HypE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OKY54653.1
Hydrogenase assembly protein HypC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
OKY54654.1
Carbamoyltransferase HypF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbamoyltransferase HypF family.
 
  
 0.971
OKY54656.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.829
OKY54658.1
Iron-only hydrogenase system regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.807
OKY54655.1
Nitrogenase molybdenum-iron protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.806
OKY54657.1
Nitrogen fixation protein NifH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NifH/BchL/ChlL family.
       0.779
BSR42_00970
Aspartate ammonia-lyase; Catalyzes the formation of fumarate from aspartate; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.769
OKY54649.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.765
OKY54648.1
Nitrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.748
Your Current Organism:
Megasphaera cerevisiae
NCBI taxonomy Id: 39029
Other names: ATCC 43254, DSM 20462, JCM 6130, M. cerevisiae, VTT E-85230, strain PAT 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.