STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKY53086.1Ubiquinone biosynthesis protein COQ7; Derived by automated computational analysis using gene prediction method: Protein Homology. (118 aa)    
Predicted Functional Partners:
BSR42_09445
TonB-dependent receptor; Frameshifted; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.916
OKY53101.1
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family.
    
 0.715
pyrK
Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
    
 
 0.618
OKY52395.1
Anaerobic sulfite reductase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.618
OKY53087.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.496
OKY52828.1
Cysteine desulfurase NifS; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.486
OKY53748.1
(Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.463
OKY52608.1
Lactate utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.457
OKY52709.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.443
OKY53983.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.434
Your Current Organism:
Megasphaera cerevisiae
NCBI taxonomy Id: 39029
Other names: ATCC 43254, DSM 20462, JCM 6130, M. cerevisiae, VTT E-85230, strain PAT 1
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