STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKY52659.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (91 aa)    
Predicted Functional Partners:
BSR42_11635
Terminase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.955
OKY52658.1
Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.951
OKY52660.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.917
OKY53211.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.864
OKY53209.1
Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.831
OKY52661.1
Holin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.827
OKY52657.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S14 family.
 
    0.797
OKY53224.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.751
OKY53218.1
HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.712
OKY53212.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.711
Your Current Organism:
Megasphaera cerevisiae
NCBI taxonomy Id: 39029
Other names: ATCC 43254, DSM 20462, JCM 6130, M. cerevisiae, VTT E-85230, strain PAT 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.