Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ldb0013Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. (385 aa)    
Predicted Functional Partners:
Ldb0563
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.753
Ldb0181
Putative transcriptional regulator (TetR family).
 
     0.706
Ldb0017
Conserved hypothetical membrane protein.
  
  
 0.695
Ldb0733
Conserved hypothetical membrane protein.
  
     0.689
Ldb0164
Conserved hypothetical protein; Contains an HNH endonuclease domain.
  
     0.677
Ldb2077
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
 
     0.657
Ldb2057
Conserved hypothetical membrane protein.
  
     0.656
Ldb0775
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.655
Ldb1732
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
 
     0.655
Ldb0184
6 Protein of unknown function, without similarity to other proteins.
  
     0.541
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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