Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ldb0031ABC transporter, ATP-binding/permease protein. (569 aa)    
Predicted Functional Partners:
Ldb0035
ABC transporter, ATP-binding protein.
     
0.934
Ldb1298
Amino acid ABC transporter, ATP-binding protein.
     
0.900
Ldb0253
Amino acid ABC transporter, ATP-binding protein.
     
0.899
glnQ
Glutamine ABC transporter, ATP-binding protein.
     
0.899
Ldb2199
Glutamine ABC transporter, ATP-binding protein.
     
0.899
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.896
Ldb0032
Putative Ser/Thr protein kinase.
 
    0.822
Ldb0030
6 Protein of unknown function, without similarity to other proteins.
       0.773
Ldb0033
6 Protein of unknown function, without similarity to other proteins.
       0.714
Ldb0029
Two-component system, sensor histidine kinase (fragment).
       0.705
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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