Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Ldb0151ABC transporter, ATP-binding protein. (451 aa)    
Predicted Functional Partners:
Ldb0150
Similar to ISL7 transposase.
 
  
 0.956
Ldb0513
Conserved hypothetical membrane protein.
 
  
 0.904
Ldb1710
Conserved hypothetical membrane protein.
 
  
 0.673
oppBII
Oligopeptide ABC transporter, permease protein.
  
 
 0.628
oppB
Oligopeptide ABC transporter, permease protein; Cf Peltoniemi et al., 2002. Arch Microbiol. 177:457-67.
  
 
 0.628
oppCII
Oligopeptide ABC transporter, permease protein.
  
 
 0.617
oppC
Oligopeptide ABC transporter, permease protein; Cf Peltoniemi et al., 2002. Arch Microbiol. 177:457-67.
  
 
 0.617
Ldb1708
ABC transporter, permease protein.
 
  
 0.617
Ldb1709
ABC transporter, ATP-binding protein.
  
  
 
0.612
Ldb0181
Putative transcriptional regulator (TetR family).
 
     0.606
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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