Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
asnB1Asparagine synthase. (649 aa)    
Predicted Functional Partners:
racD
Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
 
  
 0.968
asnA
Aspartate-ammonia ligase.
   
 
 0.935
pyrB1
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.926
ansA
Asparaginase.
     
 0.917
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.913
aspA
Putative transcriptionnal regulator (DeoR family) (fragment).
     
 0.903
ask
Aspartate kinase; Belongs to the aspartokinase family.
  
 
 0.878
Ldb0210
Conserved hypothetical protein (ATP-grasp family).
 
     0.763
Ldb0208
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
       0.584
Ldb0441
Aromatic amino acid aminotransferase.
  
 
 0.557
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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