| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Ldb0217 | pepO1 | Ldb0217 | Ldb0218 | 6 Protein of unknown function, without similarity to other proteins. | Endopeptidase. | 0.693 |
| coaD | pepO1 | Ldb0767 | Ldb0218 | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | Endopeptidase. | 0.566 |
| coaD | ruvB | Ldb0767 | Ldb1613 | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.560 |
| pepF | pepM, | Ldb2034 | Ldb0556 | Oligoendopeptidase F. | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.627 |
| pepF | pepN | Ldb2034 | Ldb2080 | Oligoendopeptidase F. | Putative nitroreductase (fragment). | 0.728 |
| pepF | pepO1 | Ldb2034 | Ldb0218 | Oligoendopeptidase F. | Endopeptidase. | 0.702 |
| pepF | pepP | Ldb2034 | Ldb1429 | Oligoendopeptidase F. | X-Pro dipeptidase PepP. | 0.792 |
| pepF | pepV | Ldb2034 | Ldb1746 | Oligoendopeptidase F. | X-His dipeptidase. | 0.799 |
| pepF | pepX | Ldb2034 | Ldb1455 | Oligoendopeptidase F. | tRNA-Arg; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline; Belongs to the peptidase S15 family. | 0.613 |
| pepM, | pepF | Ldb0556 | Ldb2034 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Oligoendopeptidase F. | 0.627 |
| pepM, | pepN | Ldb0556 | Ldb2080 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Putative nitroreductase (fragment). | 0.815 |
| pepM, | pepO1 | Ldb0556 | Ldb0218 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Endopeptidase. | 0.565 |
| pepM, | pepP | Ldb0556 | Ldb1429 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | X-Pro dipeptidase PepP. | 0.677 |
| pepM, | pepV | Ldb0556 | Ldb1746 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | X-His dipeptidase. | 0.792 |
| pepM, | pepX | Ldb0556 | Ldb1455 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | tRNA-Arg; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline; Belongs to the peptidase S15 family. | 0.809 |
| pepN | pepF | Ldb2080 | Ldb2034 | Putative nitroreductase (fragment). | Oligoendopeptidase F. | 0.728 |
| pepN | pepM, | Ldb2080 | Ldb0556 | Putative nitroreductase (fragment). | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.815 |
| pepN | pepO1 | Ldb2080 | Ldb0218 | Putative nitroreductase (fragment). | Endopeptidase. | 0.833 |
| pepN | pepP | Ldb2080 | Ldb1429 | Putative nitroreductase (fragment). | X-Pro dipeptidase PepP. | 0.843 |
| pepN | pepV | Ldb2080 | Ldb1746 | Putative nitroreductase (fragment). | X-His dipeptidase. | 0.839 |
