STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ldb0225Putative amidase. (536 aa)    
Predicted Functional Partners:
Ldb0224
Putative amidase.
 
   
0.766
Ldb1221
6 Protein of unknown function, without similarity to other proteins.
 
  
 0.701
Ldb1172
Conserved hypothetical membrane protein.
  
     0.680
Ldb1890
Similar to ISL7 transposase.
  
     0.638
Ldb0233
Conserved hypothetical membrane protein.
  
   
 0.604
mecA
Negative regulator of competence MecA; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family.
  
   
 0.570
Ldb1645
Putative penicillin binding protein.
 
   
 0.547
Ldb2160
Conserved hypothetical membrane protein.
  
   
 0.546
Ldb0226
Cation:Proton Antiporter.
       0.519
Ldb0691
Conserved hypothetical membrane protein.
  
     0.515
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.