STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppA3IIOligopeptide ABC transporter, substrate binding protein (fragment). (542 aa)    
Predicted Functional Partners:
oppCII
Oligopeptide ABC transporter, permease protein.
 
 0.984
oppBII
Oligopeptide ABC transporter, permease protein.
 
 0.983
oppDII
Oligopeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.969
oppFII
Oligopeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.956
Ldb1060
Peptide binding protein; OppA homologue.
  
  
 
0.913
Ldb0370
Peptide binding protein; OppA homologue.
  
  
 
0.909
Ldb0784
Peptide binding protein; OppA homologue.
  
  
 
0.908
oppA1II
Oligopeptide ABC transporter, substrate binding protein (fragment).
 
  
 
0.906
Ldb0206
Peptide binding protein; OppA homologue.
  
  
 
0.903
Ldb0169
Amino acid ABC transporter, substrate binding / permease protein.
  
 
 0.414
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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