STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppCIIOligopeptide ABC transporter, permease protein. (343 aa)    
Predicted Functional Partners:
oppBII
Oligopeptide ABC transporter, permease protein.
 
 0.999
oppDII
Oligopeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.999
oppFII
Oligopeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.999
oppD
Oligopeptide ABC transporter, ATP-binding protein; Cf Peltoniemi et al., 2002. Arch Microbiol. 177:457-67; Belongs to the ABC transporter superfamily.
  
 0.986
Ldb0206
Peptide binding protein; OppA homologue.
 
 0.984
oppA3II
Oligopeptide ABC transporter, substrate binding protein (fragment).
 
 0.984
Ldb0370
Peptide binding protein; OppA homologue.
 
 0.983
Ldb0784
Peptide binding protein; OppA homologue.
 
 0.983
oppA1II
Oligopeptide ABC transporter, substrate binding protein (fragment).
 
 0.982
Ldb1060
Peptide binding protein; OppA homologue.
 
 0.982
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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