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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ldb0331ABC transporter, ATP-binding protein. (236 aa)    
Predicted Functional Partners:
Ldb0330
ABC transporter, permease protein.
 
  
 0.974
Ldb0329
6 Protein of unknown function, without similarity to other proteins.
       0.775
Ldb2094
ABC transporter, ATP-binding/permease protein.
 
 0.683
Ldb0302
ABC transporter, ATP-binding/permease protein.
 
 0.613
Ldb0111
ABC transporter, ATP-binding/permease protein.
 
 0.600
metA2a
Putative Acyl-CoA dehydrogenase (fragment); Similar to ISL7 transposase.
 
 0.569
Ldb1906
Putative sugar kinase (fragment).
 
 0.568
Ldb1689
ABC transporter, ATP-binding protein (fragment).
  
  
 0.555
Ldb0332
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
       0.536
atpD
H+ transporting ATPase / ATP synthase, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
   
 
 0.536
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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