STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ldb0441Aromatic amino acid aminotransferase. (393 aa)    
Predicted Functional Partners:
secY2
Putative preprotein translocase, SecY subunit (fragment).
  
  
 
0.909
Ldb0442
Conserved hypothetical membrane protein.
 
     0.803
ask
Aspartate kinase; Belongs to the aspartokinase family.
 
 0.717
Ldb1707
Acetaldehyde dehydrogenase.
  
 
 0.581
asnB1
Asparagine synthase.
  
 
 0.566
aspA
Putative transcriptionnal regulator (DeoR family) (fragment).
    
 0.547
Ldb0313
6 Protein of unknown function, without similarity to other proteins.
  
  
 0.523
asnA
Aspartate-ammonia ligase.
     
 0.508
asd
Aspartate semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 
 0.489
Ldb1350
Homoserine dehydrogenase.
 
 
 0.462
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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