Ldb0460 protein (Lactobacillus delbrueckii) - STRING interaction network

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Score

Ldb0460

ABC transporter, ATP-binding protein. (200 aa)

Predicted Functional Partners:

Ldb0461

0.773

rpsK

0.623

Ldb2210

0.605

rpsH

0.603

rplN

0.601

rpsE

0.599

rplU

0.591

rpsC

0.574

rplD

0.571

Ldb1181

0.569

Your Current Organism:

Lactobacillus delbrueckii

NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ldb0460	Ldb0461	Ldb0460	Ldb0461	ABC transporter, ATP-binding protein.	Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.	0.773
Ldb0460	Ldb1181	Ldb0460	Ldb1181	ABC transporter, ATP-binding protein.	Glycine betaine ABC transporter, ATP-binding protein.	0.569
Ldb0460	Ldb2210	Ldb0460	Ldb2210	ABC transporter, ATP-binding protein.	Hypothetical membrane protein.	0.605
Ldb0460	rplD	Ldb0460	Ldb0397	ABC transporter, ATP-binding protein.	50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	0.571
Ldb0460	rplN	Ldb0460	Ldb0406	ABC transporter, ATP-binding protein.	50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.601
Ldb0460	rplU	Ldb0460	Ldb1431	ABC transporter, ATP-binding protein.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.591
Ldb0460	rpsC	Ldb0460	Ldb0402	ABC transporter, ATP-binding protein.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.574
Ldb0460	rpsE	Ldb0460	Ldb0413	ABC transporter, ATP-binding protein.	30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.	0.599
Ldb0460	rpsH	Ldb0460	Ldb0410	ABC transporter, ATP-binding protein.	30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.603
Ldb0460	rpsK	Ldb0460	Ldb0421	ABC transporter, ATP-binding protein.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.623
Ldb0461	Ldb0460	Ldb0461	Ldb0460	Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.	ABC transporter, ATP-binding protein.	0.773
Ldb1181	Ldb0460	Ldb1181	Ldb0460	Glycine betaine ABC transporter, ATP-binding protein.	ABC transporter, ATP-binding protein.	0.569
Ldb2210	Ldb0460	Ldb2210	Ldb0460	Hypothetical membrane protein.	ABC transporter, ATP-binding protein.	0.605
rplD	Ldb0460	Ldb0397	Ldb0460	50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	ABC transporter, ATP-binding protein.	0.571
rplD	rplN	Ldb0397	Ldb0406	50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.999
rplD	rplU	Ldb0397	Ldb1431	50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.995
rplD	rpsC	Ldb0397	Ldb0402	50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rplD	rpsE	Ldb0397	Ldb0413	50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.	0.999
rplD	rpsH	Ldb0397	Ldb0410	50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.999
rplD	rpsK	Ldb0397	Ldb0421	50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.999

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