Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ldb0461Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. (165 aa)    
Predicted Functional Partners:
Ldb0460
ABC transporter, ATP-binding protein.
       0.773
Ldb0768
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
 
     0.610
Ldb1628
Conserved hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family.
  
     0.591
Ldb0459
6 Protein of unknown function, without similarity to other proteins.
       0.542
Ldb1014
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms; Belongs to the UPF0398 family.
  
     0.516
Ldb0690
Putative phosphoglycerol transferase.
  
    0.503
Ldb1601
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.445
dacA
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
     0.444
Ldb0463
Conserved hypothetical membrane protein.
       0.430
Ldb1835
Putative phosphoglycerol transferase.
  
    0.429
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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