Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Ldb0564Conserved hypothetical membrane protein. (155 aa)    
Predicted Functional Partners:
Ldb0207
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.771
Ldb0208
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.770
Ldb0592
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.767
Ldb0336
Putative Ser/Thr protein kinase (fragment).
  
     0.765
Ldb0563
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.750
Ldb2025
Conserved hypothetical membrane protein.
  
     0.740
Ldb2027
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.736
Ldb0066
Putative RNA polymerase sigma factor.
  
     0.719
Ldb0691
Conserved hypothetical membrane protein.
  
     0.714
Ldb0719
Conserved hypothetical membrane protein.
  
     0.709
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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