Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
potA1Spermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (380 aa)    
Predicted Functional Partners:
potB1
Spermidine/putrescine ABC transporter, permease protein.
 0.998
potC1
Spermidine/putrescine ABC transporter, permeaseprotein PotC.
 
 0.998
potD1
Spermidine/putrescine ABC transporter, substratebinding protein.
 0.996
Ldb1527
ABC transporter, ATP-binding protein.
   
0.908
oppD
Oligopeptide ABC transporter, ATP-binding protein; Cf Peltoniemi et al., 2002. Arch Microbiol. 177:457-67; Belongs to the ABC transporter superfamily.
 
     
0.900
Ldb1288
ABC transporter, ATP-binding/permease protein.
 
 
   
0.899
Ldb1289
ABC transporter, ATP-binding / permease protein.
 
 
   
0.899
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
  
  
 0.867
potB2
Putative transposase (fragment).
 
 
 0.845
Ldb0154
ABC transporter, ATP-binding protein.
 
     
0.796
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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