Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ldb0676Conserved hypothetical membrane protein. (175 aa)    
Predicted Functional Partners:
Ldb2151
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.639
Ldb2062
Putative transcriptional regulator (TetR family).
  
     0.617
Ldb0677
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
       0.576
Ldb0675
Substrate binding protein; Belongs to the bacterial solute-binding protein 9 family.
       0.542
Ldb0691
Conserved hypothetical membrane protein.
  
     0.505
epsIB
EpsIB, Hypothetical protein.
  
     0.479
Ldb0159
Putative transcriptional regulator.
 
     0.474
Ldb0583
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.432
Ldb0052
Conserved hypothetical protein (fragment); Belongs to the 4-oxalocrotonate tautomerase family.
 
     0.417
Ldb0596
Putative dehydrogenase.
  
  
 0.416
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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