Ldb0684 protein (Lactobacillus delbrueckii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Ldb0684

6 Protein of unknown function, without similarity to other proteins. (191 aa)

Predicted Functional Partners:

comGC

0.932

comGD

0.757

Ldb0683

0.757

comGA

0.698

Ldb0685

0.518

ack

0.457

comEC

0.447

Your Current Organism:

Lactobacillus delbrueckii

NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ldb0683	Ldb0684	Ldb0683	Ldb0684	6 Protein of unknown function, without similarity to other proteins.	6 Protein of unknown function, without similarity to other proteins.	0.757
Ldb0683	Ldb0685	Ldb0683	Ldb0685	6 Protein of unknown function, without similarity to other proteins.	Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.	0.473
Ldb0683	ack	Ldb0683	Ldb0686	6 Protein of unknown function, without similarity to other proteins.	Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.	0.410
Ldb0683	comGC	Ldb0683	Ldb0681	6 Protein of unknown function, without similarity to other proteins.	Putative competence protein ComGB (fragment).	0.773
Ldb0683	comGD	Ldb0683	Ldb0682	6 Protein of unknown function, without similarity to other proteins.	Putative Competence protein ComGD.	0.773
Ldb0684	Ldb0683	Ldb0684	Ldb0683	6 Protein of unknown function, without similarity to other proteins.	6 Protein of unknown function, without similarity to other proteins.	0.757
Ldb0684	Ldb0685	Ldb0684	Ldb0685	6 Protein of unknown function, without similarity to other proteins.	Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.	0.518
Ldb0684	ack	Ldb0684	Ldb0686	6 Protein of unknown function, without similarity to other proteins.	Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.	0.457
Ldb0684	comEC	Ldb0684	Ldb0770	6 Protein of unknown function, without similarity to other proteins.	Competence protein ComEC.	0.447
Ldb0684	comGA	Ldb0684	Ldb0678	6 Protein of unknown function, without similarity to other proteins.	Putative competence protein ComGA.	0.698
Ldb0684	comGC	Ldb0684	Ldb0681	6 Protein of unknown function, without similarity to other proteins.	Putative competence protein ComGB (fragment).	0.932
Ldb0684	comGD	Ldb0684	Ldb0682	6 Protein of unknown function, without similarity to other proteins.	Putative Competence protein ComGD.	0.757
Ldb0685	Ldb0683	Ldb0685	Ldb0683	Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.	6 Protein of unknown function, without similarity to other proteins.	0.473
Ldb0685	Ldb0684	Ldb0685	Ldb0684	Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.	6 Protein of unknown function, without similarity to other proteins.	0.518
Ldb0685	ack	Ldb0685	Ldb0686	Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.	Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.	0.766
Ldb0685	comGC	Ldb0685	Ldb0681	Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.	Putative competence protein ComGB (fragment).	0.728
Ldb0685	comGD	Ldb0685	Ldb0682	Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.	Putative Competence protein ComGD.	0.473
ack	Ldb0683	Ldb0686	Ldb0683	Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.	6 Protein of unknown function, without similarity to other proteins.	0.410
ack	Ldb0684	Ldb0686	Ldb0684	Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.	6 Protein of unknown function, without similarity to other proteins.	0.457
ack	Ldb0685	Ldb0686	Ldb0685	Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.	Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.	0.766

page 1 of 2

Server load: low (20%) [HD]

Permalink

Network

Neighborhood

Textmining

Cooccurrence

Experiments

Coexpression

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About