STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
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[Homology]
Score
ackAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (395 aa)    
Predicted Functional Partners:
pta
Phosphate acetyltransferase.
 
 
 0.997
pox1
Pyruvate oxidase; Belongs to the TPP enzyme family.
    
 0.974
Ldb1490
Putative acylphosphatase.
     
 0.915
Ldb0534
Phosphoketolase.
 
  
 0.897
scrB
Sucrose-6-phosphate hydrolase (fragment).
     
 0.835
Ldb0685
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
    0.766
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
  
 0.759
ccpA,
Catabolite control protein A (CcpA).
  
 
 0.757
acpP2
Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
  
 0.710
Ldb1707
Acetaldehyde dehydrogenase.
  
  
 0.706
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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