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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ldb0719Conserved hypothetical membrane protein. (94 aa)    
Predicted Functional Partners:
Ldb1890
Similar to ISL7 transposase.
  
     0.765
Ldb0733
Conserved hypothetical membrane protein.
 
     0.755
Ldb0336
Putative Ser/Thr protein kinase (fragment).
  
     0.745
Ldb0208
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.735
Ldb0746
Conserved hypothetical membrane protein.
 
     0.732
Ldb0173
Conserved hypothetical membrane protein.
  
     0.723
Ldb1172
Conserved hypothetical membrane protein.
  
     0.722
Ldb0564
Conserved hypothetical membrane protein.
  
     0.709
Ldb0038
6 Protein of unknown function, without similarity to other proteins.
  
     0.699
Ldb0181
Putative transcriptional regulator (TetR family).
  
     0.699
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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