| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Ldb0761 | def | Ldb0761 | Ldb0762 | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms; Belongs to the UPF0356 family. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.510 |
| Ldb0761 | rnj | Ldb0761 | Ldb0760 | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms; Belongs to the UPF0356 family. | Putative hydrolase (metallo-beta-lactamase superfamily); An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.895 |
| crtE | rnj | Ldb1422 | Ldb0760 | Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | Putative hydrolase (metallo-beta-lactamase superfamily); An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.590 |
| crtE | rnj-2 | Ldb1422 | Ldb0774 | Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | Putative hydrolase (metallo-beta-lactamase superfamily); An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.590 |
| crtE | rny | Ldb1422 | Ldb0600 | Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | Putative phosphohydrolase (HD superfamily); Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.515 |
| crtE | topA | Ldb1422 | Ldb1273 | Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.502 |
| def | Ldb0761 | Ldb0762 | Ldb0761 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms; Belongs to the UPF0356 family. | 0.510 |
| def | rnj | Ldb0762 | Ldb0760 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Putative hydrolase (metallo-beta-lactamase superfamily); An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.502 |
| def | typA | Ldb0762 | Ldb0763 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | GTP-binding protein TypA; Putative elongation factor. | 0.537 |
| ftsK | recJ | Ldb0593 | Ldb1309 | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | RecJ, single-stranded DNA specific exonuclease. | 0.568 |
| ftsK | rnj | Ldb0593 | Ldb0760 | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | Putative hydrolase (metallo-beta-lactamase superfamily); An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.516 |
| ftsK | rnj-2 | Ldb0593 | Ldb0774 | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | Putative hydrolase (metallo-beta-lactamase superfamily); An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.456 |
| ftsK | rny | Ldb0593 | Ldb0600 | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | Putative phosphohydrolase (HD superfamily); Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.663 |
| ftsK | rpsA | Ldb0593 | Ldb0851 | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | 30S ribosomal protein S1. | 0.419 |
| ftsK | topA | Ldb0593 | Ldb1273 | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.729 |
| recJ | ftsK | Ldb1309 | Ldb0593 | RecJ, single-stranded DNA specific exonuclease. | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | 0.568 |
| recJ | rnj | Ldb1309 | Ldb0760 | RecJ, single-stranded DNA specific exonuclease. | Putative hydrolase (metallo-beta-lactamase superfamily); An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.434 |
| recJ | rnj-2 | Ldb1309 | Ldb0774 | RecJ, single-stranded DNA specific exonuclease. | Putative hydrolase (metallo-beta-lactamase superfamily); An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.434 |
| recJ | topA | Ldb1309 | Ldb1273 | RecJ, single-stranded DNA specific exonuclease. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.741 |
| rnj | Ldb0761 | Ldb0760 | Ldb0761 | Putative hydrolase (metallo-beta-lactamase superfamily); An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms; Belongs to the UPF0356 family. | 0.895 |
STRING v12.5 is now available!
