STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comEACompetence protein ComEA. (248 aa)    
Predicted Functional Partners:
comEC
Competence protein ComEC.
 
  
 0.979
comFA
Putative competence protein ComFA.
   
  
 0.934
comGA
Putative competence protein ComGA.
  
  
 0.933
comGC
Putative competence protein ComGB (fragment).
   
  
 0.908
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
      0.888
Ldb0768
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
      0.839
Ldb0339
Putative dCMP deaminase.
  
  
 0.794
holA
DNA polymerase III, delta subunit.
     
 0.731
ftsW
Cell division protein FtsW; Belongs to the SEDS family.
  
    0.703
smf
DNA processing protein.
  
  
 0.677
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.