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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comECCompetence protein ComEC. (728 aa)    
Predicted Functional Partners:
comEA
Competence protein ComEA.
 
  
 0.960
holA
DNA polymerase III, delta subunit.
 
   
 0.907
smf
DNA processing protein.
 
  
 0.863
recJ
RecJ, single-stranded DNA specific exonuclease.
 
   
 0.858
comGA
Putative competence protein ComGA.
 
  
 0.837
comGC
Putative competence protein ComGB (fragment).
   
  
 0.771
ftsW
Cell division protein FtsW; Belongs to the SEDS family.
 
  
 0.748
ftsK
Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
  
  
 0.742
Ldb0339
Putative dCMP deaminase.
 
    0.734
comFA
Putative competence protein ComFA.
   
  
 0.726
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.