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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ldb0775Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. (275 aa)    
Predicted Functional Partners:
rnj-2
Putative hydrolase (metallo-beta-lactamase superfamily); An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.792
Ldb0181
Putative transcriptional regulator (TetR family).
  
     0.775
Ldb1732
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.775
Ldb0733
Conserved hypothetical membrane protein.
  
     0.774
Ldb1890
Similar to ISL7 transposase.
  
     0.774
Ldb2057
Conserved hypothetical membrane protein.
  
     0.774
Ldb0164
Conserved hypothetical protein; Contains an HNH endonuclease domain.
  
     0.773
Ldb0220
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.770
Ldb1172
Conserved hypothetical membrane protein.
  
     0.769
Ldb0336
Putative Ser/Thr protein kinase (fragment).
  
     0.768
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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