STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ldb1045Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. (389 aa)    
Predicted Functional Partners:
Ldb0233
Conserved hypothetical membrane protein.
  
     0.696
Ldb1046
6 Protein of unknown function, without similarity to other proteins.
       0.693
Ldb1920
6 Protein of unknown function, without similarity to other proteins.
  
     0.664
Ldb0616
Conserved hypothetical membrane protein.
  
     0.649
Ldb1030
Conserved hypothetical protein (fragment).
  
     0.583
ndt1
Nucleoside deoxyribosyltransferase.
  
     0.548
Ldb2057
Conserved hypothetical membrane protein.
  
     0.533
Ldb0721
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.526
lacA
Conserved hypothetical protein (fragment); Similar to ISL5 transposase, part of ISL4-5; Belongs to the 'phage' integrase family.
  
     0.499
Ldb0733
Conserved hypothetical membrane protein.
  
     0.496
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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