Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Ldb1180Glycine betaine ABC transporter, substrate binding / permease protein. (506 aa)    
Predicted Functional Partners:
Ldb1181
Glycine betaine ABC transporter, ATP-binding protein.
 0.999
Ldb0314
Putative transcriptional regulator (MarR family).
  
  
 0.780
Ldb1707
Acetaldehyde dehydrogenase.
  
  
 0.724
gid,
Glucose inhibited division protein; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.
      
 0.703
gapN
Homoserine O-succinyltransferase (fragment); Belongs to the aldehyde dehydrogenase family.
  
  
 0.693
Ldb0759
Putative pyridine nucleotide-disulphide oxidoreductase.
 
  
 0.662
Ldb0169
Amino acid ABC transporter, substrate binding / permease protein.
     
 0.580
Ldb1299
Amino Acid ABC transporter, substrate binding.
     
 0.580
Ldb2198
Glutamine ABC transporter, substrate binding / permease protein.
     
 0.580
potA2
Spermidine/putrescine ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.579
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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