STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prtBProteinase precursor; Belongs to the peptidase S8 family. (1946 aa)    
Predicted Functional Partners:
Ldb1913
Putative lipase.
 
  
 0.743
Ldb1745
6 Protein of unknown function, without similarity to other proteins.
  
   
 0.735
lacA
Conserved hypothetical protein (fragment); Similar to ISL5 transposase, part of ISL4-5; Belongs to the 'phage' integrase family.
  
     0.704
Ldb1930
Conserved hypothetical protein (fragment).
  
     0.701
Ldb0032
Putative Ser/Thr protein kinase.
 
 
 
 0.671
Ldb1713
Hypothetical membrane protein.
 
    0.660
Ldb0968
6 Protein of unknown function, without similarity to other proteins.
 
     0.626
Ldb1553
6 Protein of unknown function, without similarity to other proteins.
 
     0.614
Ldb0026
ABC transporter, ATP binding/permease protein (fragment).
 
     0.576
prsA,
Putative peptidylprolyl isomerase; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.
     
 0.575
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.