STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ldb1352ABC transporter, ATP-binding/permease protein. (596 aa)    
Predicted Functional Partners:
Ldb1353
ABC transporter, ATP-binding/permease protein.
 
  
 
0.982
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.898
Ldb1088
ABC transporter, ATP-binding protein.
    
0.836
Ldb1119
ABC transporter, ATP-binding protein.
    
0.836
Ldb1828
ABC transporter, ATP-binding protein.
    
0.742
Ldb1289
ABC transporter, ATP-binding / permease protein.
 
 
0.626
Ldb1149
Putative transcriptional regulator (MarR family) (fragment).
 
 
0.610
Ldb1354
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
       0.517
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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