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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppDOligopeptide ABC transporter, ATP-binding protein; Cf Peltoniemi et al., 2002. Arch Microbiol. 177:457-67; Belongs to the ABC transporter superfamily. (333 aa)    
Predicted Functional Partners:
oppC
Oligopeptide ABC transporter, permease protein; Cf Peltoniemi et al., 2002. Arch Microbiol. 177:457-67.
 
 0.999
oppB
Oligopeptide ABC transporter, permease protein; Cf Peltoniemi et al., 2002. Arch Microbiol. 177:457-67.
 0.999
oppA1
Oligopeptide ABC transporter, substrate binding protein; Cf Peltoniemi et al., 2002. Arch Microbiol. 177:457-67.
 
 
 0.993
oppA2
Oligopeptide ABC transporter, substrate binding protein; Cf Peltoniemi et al., 2002. Arch Microbiol. 177:457-67.
 
 
 0.992
oppF
Oligopeptide ABC transporter, ATP-binding protein; Cf Peltoniemi et al., 2002. Arch Microbiol. 177:457-67.
 
 
0.992
oppCII
Oligopeptide ABC transporter, permease protein.
  
 0.986
oppBII
Oligopeptide ABC transporter, permease protein.
 
 0.955
Ldb0035
ABC transporter, ATP-binding protein.
     
0.900
potA1
Spermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
     
0.900
oppFII
Oligopeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
0.666
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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