Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Ldb1541Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms; Belongs to the UPF0342 family. (117 aa)    
Predicted Functional Partners:
aroK
Conserved hypothetical protein (fragment).
       0.837
Ldb1540
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
       0.837
pbp2A
Penicillin-binding protein 2A; Bifunctional protein (transglycosylase/transpeptidase).
       0.755
Ldb1354
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
    0.662
Ldb1598
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.604
ezrA
Septation ring formation regulator; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.592
Ldb1543
Pseudouridylate synthase.
       0.579
Ldb0844
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
 
     0.502
ftsQ
Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
   
 0.458
Ldb1526
ABC transporter, permease protein.
  
   
 0.458
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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