Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ldb1601Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. (131 aa)    
Predicted Functional Partners:
Ldb0844
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
 
     0.695
Ldb0854
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.672
Ldb0467
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.645
Ldb1835
Putative phosphoglycerol transferase.
  
     0.631
Ldb1600
Xanthosine triphosphate pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
       0.591
Ldb0685
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.590
Ldb0690
Putative phosphoglycerol transferase.
  
     0.572
ezrA
Septation ring formation regulator; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.494
Ldb2160
Conserved hypothetical membrane protein.
  
    0.468
Ldb0461
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.445
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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