Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ldb1709ABC transporter, ATP-binding protein. (572 aa)    
Predicted Functional Partners:
Ldb1708
ABC transporter, permease protein.
  
 0.989
Ldb1710
Conserved hypothetical membrane protein.
  
 0.981
cbiQ
Putative cobalt ABC transporter, permease protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
  
 0.820
Ldb1711
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
 
     0.810
Ldb0513
Conserved hypothetical membrane protein.
 
  
 0.644
oppBII
Oligopeptide ABC transporter, permease protein.
  
 
 0.628
oppB
Oligopeptide ABC transporter, permease protein; Cf Peltoniemi et al., 2002. Arch Microbiol. 177:457-67.
  
 
 0.628
oppCII
Oligopeptide ABC transporter, permease protein.
  
 
 0.617
oppC
Oligopeptide ABC transporter, permease protein; Cf Peltoniemi et al., 2002. Arch Microbiol. 177:457-67.
  
 
 0.617
Ldb0151
ABC transporter, ATP-binding protein.
  
  
 
0.612
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.