Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sufSCysteine desulfurase / Selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. (404 aa)    
Predicted Functional Partners:
sufB
Conserved protein involved in Fe/S cluster assembly.
 
 0.999
iscU
NifU homolog involved in Fe-S cluster formation.
 
 
 0.999
sufC
ATP-binding protein involved in Fe/S cluster assembly.
  
 0.999
sufD
Conserved protein involved in Fe/S cluster assembly.
 
 
 0.998
trxB1
Thioredoxin reductase.
  
 
  0.917
Ldb1816
Putative ABC transporter, ATP-binding protein (fragment).
       0.773
Ldb0753
Putative cysteine sulfinate desulfinase/cysteine desulfurase.
 
 
0.631
Ldb0724
Putative cysteine sulfinate desulfinase/cysteine desulfurase.
 
 
0.624
Ldb1822
Putative acetyltransferase.
       0.474
pheT
Phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
  
 0.401
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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