STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ldb1835Putative phosphoglycerol transferase. (690 aa)    
Predicted Functional Partners:
Ldb0690
Putative phosphoglycerol transferase.
  
 
 
0.909
Ldb1837
Putative glycosyltransferase.
     
 0.821
Ldb1838
Putative glycosyltransferase.
     
 0.810
mprF
Conserved hypothetical membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
     
 0.808
Ldb0685
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.693
secG
Preprotein translocase SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
 
   
 0.682
Ldb0854
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
 
  
 0.636
Ldb1601
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.631
Ldb1277
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms; Belongs to the UPF0346 family.
  
     0.568
Ldb0138
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.545
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.