Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
Ldb1892Putative transcriptional regulator (TetR family). (190 aa)    
Predicted Functional Partners:
Ldb1891
Permease; RND superfamily.
 
  
 0.780
Ldb1890
Similar to ISL7 transposase.
 
     0.777
Ldb0721
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.647
Ldb0173
Conserved hypothetical membrane protein.
  
     0.619
Ldb0208
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.600
Ldb1915
Hypothetical membrane protein.
 
     0.594
Ldb0554
Conserved hypothetical membrane protein.
  
  
 0.577
Ldb0175
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.575
arbZ
Putative fumarate reductase (flavoprotein) (fragment).
 
   
 0.570
Ldb2057
Conserved hypothetical membrane protein.
 
     0.570
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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