STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ldb1987Putative transposase. (583 aa)    
Predicted Functional Partners:
Ldb1986
5.1 Protein of unknown function similar to other proteins from the same organism.
       0.773
Ldb1713
Hypothetical membrane protein.
  
     0.731
Ldb1930
Conserved hypothetical protein (fragment).
  
     0.655
Ldb1553
6 Protein of unknown function, without similarity to other proteins.
  
     0.632
Ldb1745
6 Protein of unknown function, without similarity to other proteins.
  
     0.609
prtB
Proteinase precursor; Belongs to the peptidase S8 family.
  
     0.553
Ldb0032
Putative Ser/Thr protein kinase.
  
     0.501
Ldb0967
ABC transporter, ATP binding protein (fragment).
  
     0.476
Ldb1913
Putative lipase.
  
     0.465
Ldb1988
5.1 Protein of unknown function similar to other proteins from the same organism.
       0.460
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.