STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
epsICEpsIC, Hypothetical protein. (257 aa)    
Predicted Functional Partners:
epsID
EpsID, Hypothetical protein.
  
 0.998
epsIB
EpsIB, Hypothetical protein.
 
 
 0.997
epsIE
EpsIE, Putative glycosyltransferase.
  
  
 0.890
epsIA
EpsIA, Transcriptional regulator of eps operon (LytR family).
  
  
 0.821
epsIIC
EpsIIC, Putative glycosyltransferase.
  
  
 0.675
epsIG
EpsIG, Putative glycosyltransferase.
     
 0.644
epsIF
EpsIF, Hypothetical protein.
     
 0.642
metS
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
  
 
 0.587
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
 
 0.552
epsIIJ
EpsIIK, Putative glycosyltransferase (fragment).
 
  
 0.519
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.