| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Ldb2030 | Ldb2031 | Ldb2030 | Ldb2031 | ABC transporter, ATP-binding protein. | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | 0.746 |
| Ldb2030 | rplC | Ldb2030 | Ldb0396 | ABC transporter, ATP-binding protein. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.637 |
| Ldb2030 | rplD | Ldb2030 | Ldb0397 | ABC transporter, ATP-binding protein. | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.643 |
| Ldb2030 | rplT | Ldb2030 | Ldb1500 | ABC transporter, ATP-binding protein. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.636 |
| Ldb2030 | rplU | Ldb2030 | Ldb1431 | ABC transporter, ATP-binding protein. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.660 |
| Ldb2030 | rpmD | Ldb2030 | Ldb0414 | ABC transporter, ATP-binding protein. | 50S Ribosomal protein L30. | 0.637 |
| Ldb2030 | rpmH | Ldb2030 | Ldb2218 | ABC transporter, ATP-binding protein. | 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.636 |
| Ldb2030 | rpsC | Ldb2030 | Ldb0402 | ABC transporter, ATP-binding protein. | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.645 |
| Ldb2030 | rpsD | Ldb2030 | Ldb0722 | ABC transporter, ATP-binding protein. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.635 |
| Ldb2030 | rpsO | Ldb2030 | Ldb0773 | ABC transporter, ATP-binding protein. | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.639 |
| Ldb2031 | Ldb2030 | Ldb2031 | Ldb2030 | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | ABC transporter, ATP-binding protein. | 0.746 |
| rplC | Ldb2030 | Ldb0396 | Ldb2030 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | ABC transporter, ATP-binding protein. | 0.637 |
| rplC | rplD | Ldb0396 | Ldb0397 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.999 |
| rplC | rplT | Ldb0396 | Ldb1500 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.994 |
| rplC | rplU | Ldb0396 | Ldb1431 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.994 |
| rplC | rpmD | Ldb0396 | Ldb0414 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S Ribosomal protein L30. | 0.998 |
| rplC | rpmH | Ldb0396 | Ldb2218 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.969 |
| rplC | rpsC | Ldb0396 | Ldb0402 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
| rplC | rpsD | Ldb0396 | Ldb0722 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.995 |
| rplC | rpsO | Ldb0396 | Ldb0773 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.986 |
