Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ldb2050ABC transporter, ATP-binding/permease protein (fragment). (256 aa)    
Predicted Functional Partners:
ychF
GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
       0.820
Ldb0361
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
 
     0.701
Ldb0207
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.698
Ldb0173
Conserved hypothetical membrane protein.
  
     0.697
Ldb0208
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.696
Ldb2052
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
       0.693
parB1
Chromosome partitioning protein ParB; Belongs to the ParB family.
       0.693
parA
Chromosome partitioning protein ParA.
       0.693
parB2
Chromosome partitioning protein ParB; Belongs to the ParB family.
       0.693
gidB
Methyltransferase GidB (Glucose inhibited division protein B); Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
       0.675
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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