STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ98105.1Oxaloacetate decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD). (372 aa)    
Predicted Functional Partners:
SFR02672.1
Oxaloacetate decarboxylase, alpha subunit.
 
 
 0.990
SFR06236.1
Oxaloacetate decarboxylase, alpha subunit.
 
 
 0.912
SFQ97426.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.834
SFQ98111.1
Biotin-requiring enzyme.
    
 0.782
SFQ95187.1
Phosphoenolpyruvate carboxykinase (ATP); Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
    
 0.726
SFR09673.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
    
 0.719
SFR00162.1
Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
    
 0.712
SFQ98123.1
Acetyl-CoA carboxylase, carboxyltransferase component.
    
 0.707
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
     
 0.697
SFQ98129.1
glutaryl-CoA dehydrogenase (non-decarboxylating).
    
  0.693
Your Current Organism:
Desulfallas geothermicus
NCBI taxonomy Id: 39060
Other names: D. geothermicus, DSM 3669, Desulfotomaculum geothermicum, NBRC 112753, strain BSD
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