STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ99604.1FtsX-like permease family protein. (69 aa)    
Predicted Functional Partners:
SFQ99432.1
Putative ABC transport system ATP-binding protein.
 
 0.969
SFR09126.1
Putative ABC transport system ATP-binding protein.
 
 0.969
SFR16966.1
Putative ABC transport system ATP-binding protein.
 
 0.969
SFR09132.1
Membrane fusion protein, macrolide-specific efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.953
SFR16973.1
Membrane fusion protein, macrolide-specific efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.949
SFQ99436.1
Membrane fusion protein, macrolide-specific efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.895
SFQ99598.1
Two-component system, OmpR family, response regulator ResD.
       0.773
SFR14109.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.760
SFQ95954.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.754
SFQ97884.1
HlyD family secretion protein.
 
  
 0.690
Your Current Organism:
Desulfallas geothermicus
NCBI taxonomy Id: 39060
Other names: D. geothermicus, DSM 3669, Desulfotomaculum geothermicum, NBRC 112753, strain BSD
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