Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFQ98442.1 | SFR01389.1 | SAMN05660706_103102 | SAMN05660706_106132 | Putative regulatory protein, FmdB family. | Protein of unknown function. | 0.478 |
SFQ98442.1 | SFR03571.1 | SAMN05660706_103102 | SAMN05660706_10953 | Putative regulatory protein, FmdB family. | Predicted RNA-binding protein. | 0.525 |
SFR01389.1 | SFQ98442.1 | SAMN05660706_106132 | SAMN05660706_103102 | Protein of unknown function. | Putative regulatory protein, FmdB family. | 0.478 |
SFR01389.1 | SFR03571.1 | SAMN05660706_106132 | SAMN05660706_10953 | Protein of unknown function. | Predicted RNA-binding protein. | 0.794 |
SFR01389.1 | SFR13924.1 | SAMN05660706_106132 | SAMN05660706_12927 | Protein of unknown function. | Hypothetical protein. | 0.411 |
SFR03571.1 | SFQ98442.1 | SAMN05660706_10953 | SAMN05660706_103102 | Predicted RNA-binding protein. | Putative regulatory protein, FmdB family. | 0.525 |
SFR03571.1 | SFR01389.1 | SAMN05660706_10953 | SAMN05660706_106132 | Predicted RNA-binding protein. | Protein of unknown function. | 0.794 |
SFR13924.1 | SFR01389.1 | SAMN05660706_12927 | SAMN05660706_106132 | Hypothetical protein. | Protein of unknown function. | 0.411 |