STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR02677.1Stage III sporulation protein AH. (203 aa)    
Predicted Functional Partners:
SFR02683.1
Stage III sporulation protein AG.
 
  
 0.999
SFR02688.1
Stage III sporulation protein AF.
 
  
 0.969
SFR02720.1
Stage III sporulation protein AA.
 
  
 0.968
SFR02694.1
Stage III sporulation protein AE.
 
  
 0.963
SFR02713.1
Stage III sporulation protein AB.
 
  
 0.919
SFR02707.1
Stage III sporulation protein AC.
 
  
 0.914
SFR02699.1
Stage III sporulation protein AD.
 
  
 0.899
SFQ96711.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.834
SFQ99713.1
Stage II sporulation protein P.
  
   
 0.828
SFR15810.1
Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
  
 0.816
Your Current Organism:
Desulfallas geothermicus
NCBI taxonomy Id: 39060
Other names: D. geothermicus, DSM 3669, Desulfotomaculum geothermicum, NBRC 112753, strain BSD
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