STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR02694.1Stage III sporulation protein AE. (377 aa)    
Predicted Functional Partners:
SFR02699.1
Stage III sporulation protein AD.
 
  
 0.994
SFR02688.1
Stage III sporulation protein AF.
 
  
 0.990
SFR02707.1
Stage III sporulation protein AC.
 
  
 0.990
SFR02713.1
Stage III sporulation protein AB.
 
  
 0.988
SFR02683.1
Stage III sporulation protein AG.
 
  
 0.986
SFR02720.1
Stage III sporulation protein AA.
 
  
 0.979
SFR02677.1
Stage III sporulation protein AH.
 
  
 0.963
SFQ97873.1
Putative DeoR family transcriptional regulator, stage III sporulation protein D.
  
    0.954
SFR02479.1
Stage II sporulation protein M.
  
  
 0.864
SFR04483.1
Stage II sporulation protein R.
  
  
 0.805
Your Current Organism:
Desulfallas geothermicus
NCBI taxonomy Id: 39060
Other names: D. geothermicus, DSM 3669, Desulfotomaculum geothermicum, NBRC 112753, strain BSD
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.