STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR11182.1Hypothetical protein. (161 aa)    
Predicted Functional Partners:
SFR11170.1
Small multidrug resistance family-3 protein.
       0.773
SFR11175.1
Small multidrug resistance family-3 protein.
       0.773
SFQ99223.1
Sarcosine oxidase subunit beta.
    
 0.652
SFR00110.1
Diacylglycerol kinase (ATP).
  
  
  0.629
SFR06474.1
Thioredoxin reductase (NADPH).
    
 0.622
SFR14977.1
Copper amine oxidase N-terminal domain-containing protein.
  
 
  0.596
SFQ95022.1
Sugar phosphate permease.
  
 
 0.545
SFR01089.1
MFS transporter, NNP family, nitrate/nitrite transporter.
  
 
 0.545
SFR11165.1
Transcriptional regulator PadR-like family protein.
       0.525
SFQ95208.1
ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein.
 
  
 0.509
Your Current Organism:
Desulfallas geothermicus
NCBI taxonomy Id: 39060
Other names: D. geothermicus, DSM 3669, Desulfotomaculum geothermicum, NBRC 112753, strain BSD
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.