STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR14460.1Putative regulatory protein, FmdB family. (76 aa)    
Predicted Functional Partners:
SFR14457.1
Metallo-beta-lactamase family protein.
       0.539
SFR07916.1
CBS domain-containing protein.
  
     0.491
SFR01395.1
CBS domain-containing protein.
  
     0.483
SFQ98464.1
Dissimilatory sulfite reductase D (DsrD).
  
     0.465
SFQ98451.1
Putative zinc-or iron-chelating domain-containing protein.
  
     0.423
Your Current Organism:
Desulfallas geothermicus
NCBI taxonomy Id: 39060
Other names: D. geothermicus, DSM 3669, Desulfotomaculum geothermicum, NBRC 112753, strain BSD
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.