node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR05509.1 | SFR15103.1 | SAMN05660706_11237 | SAMN05660706_13429 | NusB antitermination factor; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Preprotein translocase subunit YajC. | 0.510 |
SFR05509.1 | SFR15121.1 | SAMN05660706_11237 | SAMN05660706_13433 | NusB antitermination factor; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Protein of unknown function. | 0.684 |
SFR05509.1 | queA | SAMN05660706_11237 | SAMN05660706_13431 | NusB antitermination factor; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.722 |
SFR05509.1 | ruvA | SAMN05660706_11237 | SAMN05660706_13436 | NusB antitermination factor; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.640 |
SFR05509.1 | ruvB | SAMN05660706_11237 | SAMN05660706_13435 | NusB antitermination factor; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.589 |
SFR05509.1 | tgt | SAMN05660706_11237 | SAMN05660706_13430 | NusB antitermination factor; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] | 0.732 |
SFR15103.1 | SFR05509.1 | SAMN05660706_13429 | SAMN05660706_11237 | Preprotein translocase subunit YajC. | NusB antitermination factor; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.510 |
SFR15103.1 | SFR15115.1 | SAMN05660706_13429 | SAMN05660706_13432 | Preprotein translocase subunit YajC. | Stage II sporulation protein D. | 0.533 |
SFR15103.1 | SFR15121.1 | SAMN05660706_13429 | SAMN05660706_13433 | Preprotein translocase subunit YajC. | Protein of unknown function. | 0.511 |
SFR15103.1 | queA | SAMN05660706_13429 | SAMN05660706_13431 | Preprotein translocase subunit YajC. | S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.797 |
SFR15103.1 | queH | SAMN05660706_13429 | SAMN05660706_13434 | Preprotein translocase subunit YajC. | Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr). | 0.436 |
SFR15103.1 | ruvA | SAMN05660706_13429 | SAMN05660706_13436 | Preprotein translocase subunit YajC. | Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.457 |
SFR15103.1 | ruvB | SAMN05660706_13429 | SAMN05660706_13435 | Preprotein translocase subunit YajC. | Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.483 |
SFR15103.1 | secD | SAMN05660706_13429 | SAMN05660706_13427 | Preprotein translocase subunit YajC. | Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.989 |
SFR15103.1 | secF | SAMN05660706_13429 | SAMN05660706_13426 | Preprotein translocase subunit YajC. | Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.960 |
SFR15103.1 | tgt | SAMN05660706_13429 | SAMN05660706_13430 | Preprotein translocase subunit YajC. | tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] | 0.855 |
SFR15115.1 | SFR15103.1 | SAMN05660706_13432 | SAMN05660706_13429 | Stage II sporulation protein D. | Preprotein translocase subunit YajC. | 0.533 |
SFR15115.1 | SFR15121.1 | SAMN05660706_13432 | SAMN05660706_13433 | Stage II sporulation protein D. | Protein of unknown function. | 0.660 |
SFR15115.1 | queA | SAMN05660706_13432 | SAMN05660706_13431 | Stage II sporulation protein D. | S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.826 |
SFR15115.1 | queH | SAMN05660706_13432 | SAMN05660706_13434 | Stage II sporulation protein D. | Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr). | 0.614 |